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This orthogroup contains 417 genes from 91 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 417 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24020 | COLLAGEN ALPHA | 337 / 417 | 80.8% | 89.9% of 375 | ≥80% support |
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 391 / 417 | 93.8% | 99.2% of 394 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000008372.1 | CAB4002667.1 | matrilin-4 isoform X3 [Paramuricea clavata] | P21941 Matrilin-1 OS=Homo sapiens OX=9606 GN=MATN1 PE=1 SV=1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000012848.1 | CAB4000278.1 | Hypothetical predicted protein [Paramuricea clavata] | O42401 Matrilin-3 OS=Gallus gallus OX=9031 GN=MATN3 PE=2 SV=1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000012856.1 | CAB4000277.1 | Hypothetical predicted protein [Paramuricea clavata] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
