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This orthogroup contains 389 genes from 29 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 389 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00096 | zf-C2H2 — Zinc finger, C2H2 type | 355 / 389 | 91.3% | 97.5% of 364 | ≥80% support |
| Pfam | PF13912 | zf-C2H2_6 — C2H2-type zinc finger | 202 / 389 | 51.9% | 55.5% of 364 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 244 / 389 | 62.7% | 84.7% of 288 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 204 / 389 | 52.4% | 70.8% of 288 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000001163.1 | CAB3999992.1 | zinc finger and BTB domain-containing 20 isoform X1 [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000003767.1 | CAB4021638.1 | zinc finger 184-like, partial [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000006606.1 | none | – | JBrowse | |
| Leptogorgia sarmentosa | ENSAPQP00000009238.1 | none | – | JBrowse | |
| Leptogorgia sarmentosa | ENSAPQP00000012641.1 | CAB3976796.1 | Zinc finger 271 (Zinc finger 7) (HZF7) (Zinc finger ZNFphex133) (Epstein-Barr virus-induced zinc finger [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000012645.1 | CAB3976796.1 | Zinc finger 271 (Zinc finger 7) (HZF7) (Zinc finger ZNFphex133) (Epstein-Barr virus-induced zinc finger [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000012754.1 | none | – | JBrowse | |
| Leptogorgia sarmentosa | ENSAPQP00000012948.1 | CAB4013817.1 | zinc finger 271-like [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000013773.1 | CAB4026413.1 | zinc finger 239-like, partial [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000020812.1 | CAB4035606.1 | zinc finger 709-like, partial [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000032734.1 | CAB3999992.1 | zinc finger and BTB domain-containing 20 isoform X1 [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000033862.1 | CAB3976796.1 | Zinc finger 271 (Zinc finger 7) (HZF7) (Zinc finger ZNFphex133) (Epstein-Barr virus-induced zinc finger [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000033865.1 | CAB3976796.1 | Zinc finger 271 (Zinc finger 7) (HZF7) (Zinc finger ZNFphex133) (Epstein-Barr virus-induced zinc finger [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000034506.1 | CAB4040112.1 | zinc finger 271-like, partial [Paramuricea clavata] | Q17895 Zinc finger protein mnm-2 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000036743.1 | CAB3977516.1 | zinc finger 271-like [Paramuricea clavata] | – | JBrowse |
