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Support counts the member genes carrying the term. % of genes is that count over all 377 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF01391 | Collagen | 197 / 377 | 52.3% | 84.6% of 233 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000037908.1 | XP_028408998.1 | LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea] | O35206 Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037922.1 | XP_028408998.1 | LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea] | O35206 Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037944.1 | XP_028408998.1 | LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea] | O35206 Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037951.1 | XP_028408998.1 | LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea] | O35206 Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037959.1 | XP_028408998.1 | LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea] | O35206 Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037970.1 | XP_028408998.1 | LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea] | O35206 Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037979.1 | XP_028408998.1 | LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea] | O35206 Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15 | JBrowse |
