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This orthogroup contains 355 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 355 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | 309 / 355 | 87.0% | 99.7% of 310 | ≥80% support |
| Pfam | PF21355 | TRAF-mep_MATH — TRAF/meprin, MATH domain | 310 / 355 | 87.3% | 97.5% of 318 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 311 / 355 | 87.6% | 97.2% of 320 | ≥80% support |
| GO | GO:0033209 Biological Process | tumor necrosis factor-mediated signaling pathway | 305 / 355 | 85.9% | 95.3% of 320 | ≥80% support |
| GO | GO:0070534 Biological Process | protein K63-linked ubiquitination | 305 / 355 | 85.9% | 95.3% of 320 | ≥80% support |
| GO | GO:0005164 Molecular Function | tumor necrosis factor receptor binding | 301 / 355 | 84.8% | 94.1% of 320 | ≥80% support |
| GO | GO:0009898 Cellular Component | cytoplasmic side of plasma membrane | 301 / 355 | 84.8% | 94.1% of 320 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000033101.1 | CAB4018369.1 | TNF receptor-associated factor 3 isoform X1 [Paramuricea clavata] | Q6IWL4 TNF receptor-associated factor 6 OS=Danio rerio OX=7955 GN=t | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037514.1 | CAB4001397.1 | TNF receptor-associated factor 5-like [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037517.1 | CAB4001397.1 | TNF receptor-associated factor 5-like [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037520.1 | CAB4001397.1 | TNF receptor-associated factor 5-like [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037526.1 | CAB4001397.1 | TNF receptor-associated factor 5-like [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037538.1 | CAB4001397.1 | TNF receptor-associated factor 5-like [Paramuricea clavata] | – | JBrowse |
