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This orthogroup contains 298 genes from 135 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 298 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10984 | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| Pfam | PF07970 | COPIIcoated_ERV — Endoplasmic reticulum vesicle transporter | 257 / 298 | 86.2% | 98.5% of 261 | ≥80% support |
| GO | GO:0005783 Cellular Component | endoplasmic reticulum | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| GO | GO:0006888 Biological Process | endoplasmic reticulum to Golgi vesicle-mediated transport | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| GO | GO:0006890 Biological Process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| GO | GO:0030134 Cellular Component | COPII-coated ER to Golgi transport vesicle | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| GO | GO:0030173 Cellular Component | obsolete integral component of Golgi membrane | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| GO | GO:0030176 Cellular Component | obsolete integral component of endoplasmic reticulum membrane | 260 / 298 | 87.3% | 100.0% of 260 | ≥80% support |
| Pfam | PF13850 | ERGIC_N — Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) | 230 / 298 | 77.2% | 88.1% of 261 | ≥50% support |
| KEGG | K20367 | ERGIC3, ERV46 — Membrane trafficking | 225 / 298 | 75.5% | 97.8% of 230 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000008153.1 | CAB3985016.1 | endoplasmic reticulum-Golgi intermediate compartment 3-like isoform X2 [Paramuricea clavata] | Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000008163.1 | CAB3985016.1 | endoplasmic reticulum-Golgi intermediate compartment 3-like isoform X2 [Paramuricea clavata] | Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000038437.1 | CAB3985016.1 | endoplasmic reticulum-Golgi intermediate compartment 3-like isoform X2 [Paramuricea clavata] | Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000038445.1 | CAB3985016.1 | endoplasmic reticulum-Golgi intermediate compartment 3-like isoform X2 [Paramuricea clavata] | Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein | JBrowse |
