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This orthogroup contains 287 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 287 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13059 | HMG-BOX TRANSCRIPTION FACTOR BBX | 251 / 287 | 87.5% | 100.0% of 251 | ≥80% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 251 / 287 | 87.5% | 100.0% of 251 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 251 / 287 | 87.5% | 100.0% of 251 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 251 / 287 | 87.5% | 100.0% of 251 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 251 / 287 | 87.5% | 100.0% of 251 | ≥80% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 227 / 287 | 79.1% | 99.1% of 229 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000028809.1 | XP_028401750.1 | protein capicua homolog [Dendronephthya gigantea] | Q924A2 Protein capicua homolog OS=Mus musculus OX=10090 GN=Cic PE=1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000028818.1 | XP_028401750.1 | protein capicua homolog [Dendronephthya gigantea] | Q924A2 Protein capicua homolog OS=Mus musculus OX=10090 GN=Cic PE=1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000028831.1 | XP_028401750.1 | protein capicua homolog [Dendronephthya gigantea] | Q924A2 Protein capicua homolog OS=Mus musculus OX=10090 GN=Cic PE=1 | JBrowse |
