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This orthogroup contains 281 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 281 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10662 | NUCLEAR RNA EXPORT FACTOR | 236 / 281 | 84.0% | 99.2% of 238 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 237 / 281 | 84.3% | 99.2% of 239 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 236 / 281 | 84.0% | 98.7% of 239 | ≥80% support |
| GO | GO:0016973 Biological Process | poly(A)+ mRNA export from nucleus | 236 / 281 | 84.0% | 98.7% of 239 | ≥80% support |
| Pfam | PF09162 | Tap-RNA_bind — Tap, RNA-binding | 191 / 281 | 68.0% | 84.1% of 227 | ≥50% support |
| Pfam | PF03943 | TAP_C — TAP C-terminal domain | 145 / 281 | 51.6% | 63.9% of 227 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 200 / 281 | 71.2% | 83.7% of 239 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 192 / 281 | 68.3% | 80.3% of 239 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 191 / 281 | 68.0% | 79.9% of 239 | ≥50% support |
| GO | GO:0006406 Biological Process | mRNA export from nucleus | 191 / 281 | 68.0% | 79.9% of 239 | ≥50% support |
| GO | GO:0051028 Biological Process | mRNA transport | 150 / 281 | 53.4% | 62.8% of 239 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000032979.1 | XP_028398660.1 | nuclear RNA export factor 1-like [Dendronephthya gigantea] | Q9UBU9 Nuclear RNA export factor 1 OS=Homo sapiens OX=9606 GN=NXF1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000032992.1 | XP_028398660.1 | nuclear RNA export factor 1-like [Dendronephthya gigantea] | P58797 Nuclear RNA export factor 1 OS=Coturnix japonica OX=93934 GN | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037651.1 | CAB3980201.1 | nuclear RNA export factor 1 [Paramuricea clavata] | Q1RMS5 Nuclear RNA export factor 1 OS=Bos taurus OX=9913 GN=NXF1 PE | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037661.1 | CAB3980201.1 | nuclear RNA export factor 1 [Paramuricea clavata] | Q99JX7 Nuclear RNA export factor 1 OS=Mus musculus OX=10090 GN=Nxf1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000039592.1 | CAB3980201.1 | nuclear RNA export factor 1 [Paramuricea clavata] | P58797 Nuclear RNA export factor 1 OS=Coturnix japonica OX=93934 GN | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000039634.1 | CAB3980201.1 | nuclear RNA export factor 1 [Paramuricea clavata] | – | JBrowse |
