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This orthogroup contains 279 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 279 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48249 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 | 245 / 279 | 87.8% | 99.2% of 247 | ≥80% support |
| GO | GO:0003713 Molecular Function | transcription coactivator activity | 245 / 279 | 87.8% | 99.2% of 247 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 245 / 279 | 87.8% | 99.2% of 247 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 245 / 279 | 87.8% | 99.2% of 247 | ≥80% support |
| Pfam | PF06333 | Med13_C — Mediator complex subunit 13 C-terminal domain | 211 / 279 | 75.6% | 93.0% of 227 | ≥50% support |
| Pfam | PF18296 | MID_MedPIWI — MID domain of medPIWI | 207 / 279 | 74.2% | 91.2% of 227 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 212 / 279 | 76.0% | 85.8% of 247 | ≥50% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 211 / 279 | 75.6% | 85.4% of 247 | ≥50% support |
| KEGG | K15164 | MED13 — Transcription machinery | 140 / 279 | 50.2% | 97.2% of 144 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000009655.1 | XP_028400913.1 | mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Dendronephthya gigantea] | A2VCZ5 Mediator of RNA polymerase II transcription subunit 13-like | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000009679.1 | XP_028400913.1 | mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Dendronephthya gigantea] | Q9UHV7 Mediator of RNA polymerase II transcription subunit 13 OS=Ho | JBrowse |
