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This orthogroup contains 272 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 272 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10694 | LYSINE-SPECIFIC DEMETHYLASE | 195 / 272 | 71.7% | 98.5% of 198 | ≥50% support |
| Pfam | PF02373 | JmjC | 177 / 272 | 65.1% | 83.9% of 211 | ≥50% support |
| Pfam | PF01388 | ARID | 173 / 272 | 63.6% | 82.0% of 211 | ≥50% support |
| Pfam | PF02375 | JmjN | 160 / 272 | 58.8% | 75.8% of 211 | ≥50% support |
| GO | GO:0000785 Cellular Component | chromatin | 195 / 272 | 71.7% | 95.6% of 204 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 195 / 272 | 71.7% | 95.6% of 204 | ≥50% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 195 / 272 | 71.7% | 95.6% of 204 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 195 / 272 | 71.7% | 95.6% of 204 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 182 / 272 | 66.9% | 89.2% of 204 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000009801.1 | CAB3997744.1 | Jumonji isoform X1 [Paramuricea clavata] | Q1LVC2 Protein Jumonji OS=Danio rerio OX=7955 GN=jarid2b PE=3 SV=2 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000009820.1 | CAB3997743.1 | Jumonji isoform X1 [Paramuricea clavata] | Q9VT00 Jumonji, AT rich interactive domain protein 2 OS=Drosophila | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000009831.1 | CAB3997744.1 | Jumonji isoform X1 [Paramuricea clavata] | Q9VT00 Jumonji, AT rich interactive domain protein 2 OS=Drosophila | JBrowse |
