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This orthogroup contains 270 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 270 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR20959 | TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER | 236 / 270 | 87.4% | 99.6% of 237 | ≥80% support |
| GO | GO:0009306 Biological Process | protein secretion | 236 / 270 | 87.4% | 99.6% of 237 | ≥80% support |
| Pfam | PF10363 | RTP1_C1 — Required for nuclear transport of RNA pol II C-terminus 1 | 190 / 270 | 70.4% | 95.5% of 199 | ≥50% support |
| Pfam | PF10304 | RTP1_C2 — Required for nuclear transport of RNA pol II C-terminus 2 | 154 / 270 | 57.0% | 77.4% of 199 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000008235.1 | XP_028405085.1 | transport and Golgi organization protein 6 homolog [Dendronephthya gigantea] | Q8C3S2 Transport and Golgi organization protein 6 homolog OS=Mus mu | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000008247.1 | XP_028405085.1 | transport and Golgi organization protein 6 homolog [Dendronephthya gigantea] | Q8C3S2 Transport and Golgi organization protein 6 homolog OS=Mus mu | JBrowse |
