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This orthogroup contains 269 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 269 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12820 | VACUOLAR SORTING PROTEIN 53 | 235 / 269 | 87.4% | 99.2% of 237 | ≥80% support |
| GO | GO:0000938 Cellular Component | GARP complex | 235 / 269 | 87.4% | 99.6% of 236 | ≥80% support |
| GO | GO:0042147 Biological Process | retrograde transport, endosome to Golgi | 235 / 269 | 87.4% | 99.6% of 236 | ≥80% support |
| Pfam | PF04100 | Vps53_N — Vps53, N-terminal | 214 / 269 | 79.6% | 92.6% of 231 | ≥50% support |
| Pfam | PF16854 | VPS53_C — Vacuolar protein sorting-associated protein 53 C-terminus | 194 / 269 | 72.1% | 84.0% of 231 | ≥50% support |
| KEGG | K20299 | VPS53 — Membrane trafficking | 177 / 269 | 65.8% | 97.8% of 181 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000007704.1 | CAB3985677.1 | vacuolar sorting-associated 53 homolog [Paramuricea clavata] | Q5ZLD7 Vacuolar protein sorting-associated protein 53 homolog OS=Ga | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000007724.1 | XP_028396415.1 | vacuolar protein sorting-associated protein 53 homolog isoform X1 [Dendronephthya gigantea] | Q5ZLD7 Vacuolar protein sorting-associated protein 53 homolog OS=Ga | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000039400.1 | XP_028396415.1 | vacuolar protein sorting-associated protein 53 homolog isoform X1 [Dendronephthya gigantea] | Q5ZLD7 Vacuolar protein sorting-associated protein 53 homolog OS=Ga | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000039407.1 | XP_028396415.1 | vacuolar protein sorting-associated protein 53 homolog isoform X1 [Dendronephthya gigantea] | Q5ZLD7 Vacuolar protein sorting-associated protein 53 homolog OS=Ga | JBrowse |
