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This orthogroup contains 263 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 263 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12746 | NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 | 240 / 263 | 91.3% | 100.0% of 240 | ≥80% support |
| Pfam | PF04981 | NMD3 | 222 / 263 | 84.4% | 94.9% of 234 | ≥80% support |
| GO | GO:0000055 Biological Process | ribosomal large subunit export from nucleus | 240 / 263 | 91.3% | 100.0% of 240 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 240 / 263 | 91.3% | 100.0% of 240 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 240 / 263 | 91.3% | 100.0% of 240 | ≥80% support |
| GO | GO:0043023 Molecular Function | ribosomal large subunit binding | 240 / 263 | 91.3% | 100.0% of 240 | ≥80% support |
| Pfam | PF21192 | NMD3_OB — NMD3 OB-fold domain | 202 / 263 | 76.8% | 86.3% of 234 | ≥50% support |
| Pfam | PF21193 | NMD_SH3 — NMD3 SH3 domain | 184 / 263 | 70.0% | 78.6% of 234 | ≥50% support |
| KEGG | K07562 | NMD3 — Ribosome biogenesis | 162 / 263 | 61.6% | 100.0% of 162 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000010694.1 | XP_028405919.1 | 60S ribosomal export protein NMD3-like [Dendronephthya gigantea] | Q6GNS3 60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 | JBrowse |
