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This orthogroup contains 263 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 263 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12998 | UNCHARACTERIZED | 237 / 263 | 90.1% | 99.6% of 238 | ≥80% support |
| Pfam | PF05206 | TRM13 | 225 / 263 | 85.6% | 94.9% of 237 | ≥80% support |
| GO | GO:0008175 Molecular Function | tRNA methyltransferase activity | 237 / 263 | 90.1% | 99.2% of 239 | ≥80% support |
| GO | GO:0030488 Biological Process | tRNA methylation | 237 / 263 | 90.1% | 99.2% of 239 | ≥80% support |
| GO | GO:0106050 Molecular Function | tRNA 2'-O-methyltransferase activity | 237 / 263 | 90.1% | 99.2% of 239 | ≥80% support |
| GO | GO:0008168 Molecular Function | methyltransferase activity | 235 / 263 | 89.4% | 98.3% of 239 | ≥80% support |
| GO | GO:0008033 Biological Process | tRNA processing | 225 / 263 | 85.6% | 94.1% of 239 | ≥80% support |
| Pfam | PF11722 | zf-TRM13_CCCH — CCCH zinc finger in TRM13 protein | 167 / 263 | 63.5% | 70.5% of 237 | ≥50% support |
| Pfam | PF05253 | zf-U11-48K — U11-48K-like CHHC zinc finger | 161 / 263 | 61.2% | 67.9% of 237 | ≥50% support |
| KEGG | K15446 | TRM13, CCDC76 — Transfer RNA biogenesis | 150 / 263 | 57.0% | 99.3% of 151 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000014587.1 | XP_028398915.1 | tRNA:m(4)X modification enzyme TRM13 homolog [Dendronephthya gigantea] | Q8BYH3 tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000014602.1 | XP_028398915.1 | tRNA:m(4)X modification enzyme TRM13 homolog [Dendronephthya gigantea] | Q8BYH3 tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000014621.1 | XP_028398915.1 | tRNA:m(4)X modification enzyme TRM13 homolog [Dendronephthya gigantea] | Q8BYH3 tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus | JBrowse |
