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This orthogroup contains 240 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 240 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | UCH — Ubiquitin carboxyl-terminal hydrolase | 199 / 240 | 82.9% | 100.0% of 199 | ≥80% support |
| GO | GO:0004843 Molecular Function | cysteine-type deubiquitinase activity | 199 / 240 | 82.9% | 100.0% of 199 | ≥80% support |
| GO | GO:0016579 Biological Process | protein deubiquitination | 199 / 240 | 82.9% | 100.0% of 199 | ≥80% support |
| PANTHER | PTHR24006 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | 182 / 240 | 75.8% | 95.3% of 191 | ≥50% support |
| GO | GO:0005829 Cellular Component | cytosol | 186 / 240 | 77.5% | 93.5% of 199 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 182 / 240 | 75.8% | 91.5% of 199 | ≥50% support |
| GO | GO:0010506 Biological Process | regulation of autophagy | 182 / 240 | 75.8% | 91.5% of 199 | ≥50% support |
| GO | GO:0030330 Biological Process | DNA damage response, signal transduction by p53 class mediator | 182 / 240 | 75.8% | 91.5% of 199 | ≥50% support |
| KEGG | K11841 | USP10, UBP3 — Ubiquitin system | 162 / 240 | 67.5% | 99.4% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000039574.1 | CAB3996014.1 | ubiquitin carboxyl-terminal hydrolase 10 isoform X1 [Paramuricea clavata] | A5PJS6 Ubiquitin carboxyl-terminal hydrolase 10 OS=Bos taurus OX=99 | JBrowse |
