OG0005409

View gene tree Interactive tree, one tip per member sequence

Member genes: 236
Species: 139
Sequences: 236
Best annotation support: 89.4%

Downloads ⬇ Alignment (FASTA.gz) ⬇ Sequences (FASTA)

Consensus functional annotation

No term is shared by every member gene — the best-supported term below covers 89.4% of the 236 members.

Support counts the member genes carrying the term. % of genes is that count over all 236 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.

Source	Term	Name / description	Support	% of genes	% annotated	Consistency
PANTHER	PTHR23163	RING FINGER PROTEIN-RELATED	211 / 236	89.4%	99.5% of 212	≥80% support
GO	GO:0004842 Molecular Function	ubiquitin-protein transferase activity	211 / 236	89.4%	99.5% of 212	≥80% support
GO	GO:0005634 Cellular Component	nucleus	211 / 236	89.4%	99.5% of 212	≥80% support
GO	GO:0033503 Cellular Component	HULC complex	211 / 236	89.4%	99.5% of 212	≥80% support
GO	GO:0061630 Molecular Function	ubiquitin protein ligase activity	211 / 236	89.4%	99.5% of 212	≥80% support
GO	GO:0071894 Biological Process	obsolete histone H2B conserved C-terminal lysine ubiquitination	211 / 236	89.4%	99.5% of 212	≥80% support
Pfam	PF00097	zf-C3HC4 — Zinc finger, C3HC4 type (RING finger)	169 / 236	71.6%	94.4% of 179	≥50% support
GO	GO:0046872 Molecular Function	metal ion binding	169 / 236	71.6%	79.7% of 212	≥50% support
KEGG	K10696	BRE1 — Ubiquitin system	151 / 236	64.0%	97.4% of 155	≥50% support

📊 Total members in OG0005409: 1 (filtered to LSARM · show all species)

Show: genes per page

Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.

Species	Gene ID	Top NCBI-NR hit (accession)	Top NCBI-NR hit description (source organism)	Top UniProt hit (Swiss-Prot)	Genome browser
Leptogorgia sarmentosa	ENSAPQP00000008241.1	XP_028400648.1	E3 ubiquitin-protein ligase BRE1B-like [Dendronephthya gigantea]	Q9VRP9 E3 ubiquitin-protein ligase Bre1 OS=Drosophila melanogaster	JBrowse

« First ‹ Previous 1 Next › Last »

Go to page: of 1 pages