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This orthogroup contains 226 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 226 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11950 | RUNT RELATED | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| Pfam | PF00853 | Runt | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 181 / 226 | 80.1% | 99.5% of 182 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000009112.1 | CAB3980801.1 | Runt-related transcription factor 1 [Paramuricea clavata] | Q63046 Runt-related transcription factor 1 OS=Rattus norvegicus OX= | JBrowse |
