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This orthogroup contains 223 genes from 133 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 223 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR17250 | NEGATIVE ELONGATION FACTOR E | 177 / 223 | 79.4% | 100.0% of 177 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 161 / 223 | 72.2% | 100.0% of 161 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 177 / 223 | 79.4% | 96.7% of 183 | ≥50% support |
| GO | GO:0032021 Cellular Component | NELF complex | 177 / 223 | 79.4% | 96.7% of 183 | ≥50% support |
| GO | GO:0034244 Biological Process | negative regulation of transcription elongation by RNA polymerase II | 177 / 223 | 79.4% | 96.7% of 183 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 172 / 223 | 77.1% | 94.0% of 183 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 164 / 223 | 73.5% | 89.6% of 183 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000037445.1 | none | – | JBrowse | |
| Leptogorgia sarmentosa | ENSAPQP00000037453.1 | XP_028393063.1 | negative elongation factor E-like [Dendronephthya gigantea] | F1QB54 Polyadenylate-binding protein 1A OS=Danio rerio OX=7955 GN=p | JBrowse |
