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This orthogroup contains 223 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 223 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10252 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 181 / 223 | 81.2% | 100.0% of 181 | ≥80% support |
| GO | GO:0046982 Molecular Function | protein heterodimerization activity | 185 / 223 | 83.0% | 100.0% of 185 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 181 / 223 | 81.2% | 97.8% of 185 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 180 / 223 | 80.7% | 97.3% of 185 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 180 / 223 | 80.7% | 97.3% of 185 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 180 / 223 | 80.7% | 97.3% of 185 | ≥80% support |
| Pfam | PF00125 | Histone | 168 / 223 | 75.3% | 93.3% of 180 | ≥50% support |
| GO | GO:0001228 Molecular Function | DNA-binding transcription activator activity, RNA polymerase II-specific | 177 / 223 | 79.4% | 95.7% of 185 | ≥50% support |
| GO | GO:0016602 Cellular Component | CCAAT-binding factor complex | 177 / 223 | 79.4% | 95.7% of 185 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 168 / 223 | 75.3% | 90.8% of 185 | ≥50% support |
| KEGG | K08066 | NFYC, HAP5 — Transcription factors | 166 / 223 | 74.4% | 98.2% of 169 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000027282.1 | XP_028397279.1 | nuclear transcription factor Y subunit gamma-like [Dendronephthya gigantea] | P70353 Nuclear transcription factor Y subunit gamma OS=Mus musculus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000027300.1 | XP_028397279.1 | nuclear transcription factor Y subunit gamma-like [Dendronephthya gigantea] | P70353 Nuclear transcription factor Y subunit gamma OS=Mus musculus | JBrowse |
