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This orthogroup contains 221 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 221 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12555 | UBIQUITIN FUSION DEGRADATON PROTEIN 1 | 197 / 221 | 89.1% | 100.0% of 197 | ≥80% support |
| Pfam | PF03152 | UFD1 | 197 / 221 | 89.1% | 100.0% of 197 | ≥80% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 197 / 221 | 89.1% | 100.0% of 197 | ≥80% support |
| GO | GO:0030433 Biological Process | obsolete ubiquitin-dependent ERAD pathway | 197 / 221 | 89.1% | 100.0% of 197 | ≥80% support |
| GO | GO:0031593 Molecular Function | polyubiquitin modification-dependent protein binding | 197 / 221 | 89.1% | 100.0% of 197 | ≥80% support |
| GO | GO:0034098 Cellular Component | VCP-NPL4-UFD1 AAA ATPase complex | 197 / 221 | 89.1% | 100.0% of 197 | ≥80% support |
| GO | GO:0071712 Biological Process | obsolete ER-associated misfolded protein catabolic process | 197 / 221 | 89.1% | 100.0% of 197 | ≥80% support |
| KEGG | K14016 | UFD1 — Ribosome biogenesis | 167 / 221 | 75.6% | 99.4% of 168 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000008692.1 | CAB3988442.1 | ubiquitin fusion degradation 1 homolog [Paramuricea clavata] | Q92890 Ubiquitin recognition factor in ER-associated degradation pr | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000008712.1 | CAB3988442.1 | ubiquitin fusion degradation 1 homolog [Paramuricea clavata] | Q92890 Ubiquitin recognition factor in ER-associated degradation pr | JBrowse |
