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This orthogroup contains 220 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 220 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15141 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 | 181 / 220 | 82.3% | 98.4% of 184 | ≥80% support |
| Pfam | PF08711 | Med26 — TFIIS helical bundle-like domain | 163 / 220 | 74.1% | 90.1% of 181 | ≥50% support |
| Pfam | PF06881 | Elongin_A — RNA polymerase II transcription factor SIII (Elongin) subunit A | 158 / 220 | 71.8% | 87.3% of 181 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 173 / 220 | 78.6% | 98.9% of 175 | ≥50% support |
| GO | GO:0006368 Biological Process | transcription elongation by RNA polymerase II | 158 / 220 | 71.8% | 90.3% of 175 | ≥50% support |
| GO | GO:0070449 Cellular Component | elongin complex | 158 / 220 | 71.8% | 90.3% of 175 | ≥50% support |
| KEGG | K15076 | ELOA, TCEB3 — DNA repair and recombination proteins | 137 / 220 | 62.3% | 97.2% of 141 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000009346.1 | CAB3978496.1 | transcription elongation factor B polypeptide 3-like [Paramuricea clavata] | Q14241 Elongin-A OS=Homo sapiens OX=9606 GN=ELOA PE=1 SV=3 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000009363.1 | XP_028405161.1 | elongin-A-like [Dendronephthya gigantea] | Q63187 Elongin-A OS=Rattus norvegicus OX=10116 GN=Eloa PE=1 SV=1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000009371.1 | XP_028405161.1 | elongin-A-like [Dendronephthya gigantea] | Q63187 Elongin-A OS=Rattus norvegicus OX=10116 GN=Eloa PE=1 SV=1 | JBrowse |
