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This orthogroup contains 206 genes from 130 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 206 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF02229 | PC4 | 178 / 206 | 86.4% | 96.2% of 185 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 182 / 206 | 88.4% | 97.9% of 186 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 180 / 206 | 87.4% | 96.8% of 186 | ≥80% support |
| PANTHER | PTHR13215 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR | 164 / 206 | 79.6% | 95.4% of 172 | ≥50% support |
| GO | GO:0003713 Molecular Function | transcription coactivator activity | 164 / 206 | 79.6% | 88.2% of 186 | ≥50% support |
| GO | GO:0060261 Biological Process | positive regulation of transcription initiation by RNA polymerase II | 164 / 206 | 79.6% | 88.2% of 186 | ≥50% support |
| KEGG | K25815 | SUB1 — Transcription machinery | 130 / 206 | 63.1% | 92.9% of 140 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000013869.1 | CAB4001206.1 | activated RNA polymerase II transcriptional coactivator p15 [Paramuricea clavata] | P11031 Activated RNA polymerase II transcriptional coactivator p15 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000013884.1 | CAB4001206.1 | activated RNA polymerase II transcriptional coactivator p15 [Paramuricea clavata] | Q5ZK63 Activated RNA polymerase II transcriptional coactivator p15 | JBrowse |
