← Back to the gene family browser
This orthogroup contains 204 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 204 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11760 | 30S/40S RIBOSOMAL PROTEIN S3 | 178 / 204 | 87.3% | 98.9% of 180 | ≥80% support |
| Pfam | PF00189 | Ribosomal_S3_C — Ribosomal protein S3, C-terminal domain | 178 / 204 | 87.3% | 98.9% of 180 | ≥80% support |
| Pfam | PF07650 | KH_2 — KH domain | 172 / 204 | 84.3% | 95.6% of 180 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 179 / 204 | 87.8% | 99.4% of 180 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 179 / 204 | 87.8% | 99.4% of 180 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 178 / 204 | 87.3% | 98.9% of 180 | ≥80% support |
| GO | GO:0022627 Cellular Component | cytosolic small ribosomal subunit | 178 / 204 | 87.3% | 98.9% of 180 | ≥80% support |
| GO | GO:2001235 Biological Process | positive regulation of apoptotic signaling pathway | 174 / 204 | 85.3% | 96.7% of 180 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 173 / 204 | 84.8% | 96.1% of 180 | ≥80% support |
| GO | GO:0015935 Cellular Component | small ribosomal subunit | 169 / 204 | 82.8% | 93.9% of 180 | ≥80% support |
| KEGG | K02985 | RP-S3e, RPS3 — Ribosome | 173 / 204 | 84.8% | 97.2% of 178 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000028965.1 | CAB3999018.1 | 40S ribosomal S3 [Paramuricea clavata] | Q3T169 Small ribosomal subunit protein uS3 OS=Bos taurus OX=9913 GN | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000028976.1 | CAB3999018.1 | 40S ribosomal S3 [Paramuricea clavata] | Q3T169 Small ribosomal subunit protein uS3 OS=Bos taurus OX=9913 GN | JBrowse |
