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Support counts the member genes carrying the term. % of genes is that count over all 176 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46117 | FI24210P1 | 127 / 176 | 72.2% | 98.5% of 129 | ≥50% support |
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 131 / 176 | 74.4% | 98.5% of 133 | ≥50% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 132 / 176 | 75.0% | 98.5% of 134 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 127 / 176 | 72.2% | 94.8% of 134 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 127 / 176 | 72.2% | 94.8% of 134 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 127 / 176 | 72.2% | 94.8% of 134 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000024450.1 | CAB4012601.1 | Upstream stimulatory factor 1 [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000024457.1 | CAB4012601.1 | Upstream stimulatory factor 1 [Paramuricea clavata] | Q6XBT4 Upstream stimulatory factor 1 OS=Bos taurus OX=9913 GN=USF1 | JBrowse |
