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This orthogroup contains 6,125 genes from 132 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 6,125 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13710 | DNA HELICASE RECQ FAMILY MEMBER | 4587 / 6,125 | 74.9% | 99.5% of 4,608 | ≥50% support |
| GO | GO:0005694 Cellular Component | chromosome | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006281 Biological Process | DNA repair | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006310 Biological Process | DNA recombination | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0009378 Molecular Function | four-way junction helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0032508 Biological Process | DNA duplex unwinding | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0043138 Molecular Function | 3'-5' DNA helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0006268 Biological Process | DNA unwinding involved in DNA replication | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 4430 / 6,125 | 72.3% | 95.3% of 4,648 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN00472-RA | CAH3176106.1 | unnamed protein product [Porites lobata] | D4ACP5 ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 | JBrowse |
| Leptoseris scabra | ANN00874-RA | XP_022806483.1 | mediator of RNA polymerase II transcription subunit 34-like [Stylophora pistillata] | – | JBrowse |
| Leptoseris scabra | ANN00876-RA | XP_022806483.1 | mediator of RNA polymerase II transcription subunit 34-like [Stylophora pistillata] | – | JBrowse |
| Leptoseris scabra | ANN01264-RA | CAH3162408.1 | unnamed protein product [Porites lobata] | Q5UPX0 Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba pol | JBrowse |
| Leptoseris scabra | ANN01265-RA | KAJ7372026.1 | hypothetical protein OS493_021454 [Desmophyllum pertusum] | – | JBrowse |
| Leptoseris scabra | ANN01378-RA | KAJ7353900.1 | hypothetical protein OS493_031607 [Desmophyllum pertusum] | Q90744 Alpha-N-acetylgalactosaminidase OS=Gallus gallus OX=9031 GN= | JBrowse |
| Leptoseris scabra | ANN01536-RA | CAH3169386.1 | unnamed protein product [Porites evermanni] | Q09811 ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces | JBrowse |
| Leptoseris scabra | ANN01819-RA | CAH3029271.1 | unnamed protein product, partial [Porites evermanni] | – | JBrowse |
| Leptoseris scabra | ANN02265-RA | XP_020618505.1 | LOW QUALITY PROTEIN: putative ATP-dependent DNA helicase Q1 [Orbicella faveolata] | Q09811 ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces | JBrowse |
| Leptoseris scabra | ANN02461-RA | CAH3040789.1 | unnamed protein product [Porites lobata] | – | JBrowse |
| Leptoseris scabra | ANN04449-RA | XP_022807578.1 | ATP-dependent helicase SGS1-like [Stylophora pistillata] | P35187 ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (str | JBrowse |
| Leptoseris scabra | ANN04495-RA | XP_044173539.1 | ATP-dependent DNA helicase Q-like 1 [Acropora millepora] | – | JBrowse |
| Leptoseris scabra | ANN04496-RA | CAH3137951.1 | unnamed protein product, partial [Porites lobata] | – | JBrowse |
| Leptoseris scabra | ANN04498-RA | XP_015772510.1 | PREDICTED: ATP-dependent DNA helicase RecQ-like [Acropora digitifera] | – | JBrowse |
| Leptoseris scabra | ANN04587-RA | XP_028419003.1 | uncharacterized protein LOC114544619 [Dendronephthya gigantea] | – | JBrowse |
| Leptoseris scabra | ANN04810-RA | KAJ7353900.1 | hypothetical protein OS493_031607 [Desmophyllum pertusum] | D4ACP5 ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 | JBrowse |
| Leptoseris scabra | ANN04811-RA | XP_015760079.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 34-like [Acropora digitifera] | O93530 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Leptoseris scabra | ANN04852-RA | XP_044170885.1 | ATP-dependent DNA helicase RecQ-like [Acropora millepora] | Q9FT72 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | JBrowse |
| Leptoseris scabra | ANN05112-RA | XP_015760079.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 34-like [Acropora digitifera] | O93530 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Leptoseris scabra | ANN05304-RA | CAH3029271.1 | unnamed protein product, partial [Porites evermanni] | Q9FT72 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | JBrowse |
