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This orthogroup contains 3,941 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 3,941 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF13676 | TIR_2 — TIR domain | 2445 / 3,941 | 62.0% | 72.1% of 3,390 | ≥50% support |
| GO | GO:0007165 Biological Process | signal transduction | 2646 / 3,941 | 67.1% | 89.8% of 2,947 | ≥50% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 1976 / 3,941 | 50.1% | 67.1% of 2,947 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN02263-RA | PFX14496.1 | Toll-like receptor 1 [Stylophora pistillata] | Q9WV82 Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 | JBrowse |
| Leptoseris scabra | ANN02264-RA | XP_015774097.1 | PREDICTED: toll-like receptor 1 [Acropora digitifera] | Q68Y56 Toll-like receptor 4 OS=Sus scrofa OX=9823 GN=TLR4 PE=2 SV=1 | JBrowse |
| Leptoseris scabra | ANN02266-RA | PFX14496.1 | Toll-like receptor 1 [Stylophora pistillata] | Q9WV82 Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 | JBrowse |
| Leptoseris scabra | ANN02268-RA | CAH3037698.1 | unnamed protein product [Pocillopora meandrina] | Q9WV82 Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 | JBrowse |
| Leptoseris scabra | ANN02272-RA | XP_027055449.1 | uncharacterized protein LOC113682481 [Pocillopora damicornis] | Q9WV82 Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 | JBrowse |
| Leptoseris scabra | ANN02665-RA | XP_027059291.1 | uncharacterized protein LOC113685907 isoform X6 [Pocillopora damicornis] | Q9WV82 Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 | JBrowse |
| Leptoseris scabra | ANN02670-RA | XP_027059291.1 | uncharacterized protein LOC113685907 isoform X6 [Pocillopora damicornis] | Q9WV82 Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 | JBrowse |
| Leptoseris scabra | ANN02671-RA | XP_027059291.1 | uncharacterized protein LOC113685907 isoform X6 [Pocillopora damicornis] | Q9WV82 Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 | JBrowse |
| Leptoseris scabra | ANN12934-RA | KAJ7386699.1 | hypothetical protein OS493_006710 [Desmophyllum pertusum] | P35331 Neuronal cell adhesion molecule OS=Gallus gallus OX=9031 PE= | JBrowse |
| Leptoseris scabra | ANN12935-RA | KAJ7386699.1 | hypothetical protein OS493_006710 [Desmophyllum pertusum] | – | JBrowse |
| Leptoseris scabra | ANN12936-RA | KAJ7386689.1 | hypothetical protein OS493_006698 [Desmophyllum pertusum] | Q9V477 Toll-like receptor Tollo OS=Drosophila melanogaster OX=7227 | JBrowse |
| Leptoseris scabra | ANN12937-RA | KAJ7386689.1 | hypothetical protein OS493_006698 [Desmophyllum pertusum] | Q9V477 Toll-like receptor Tollo OS=Drosophila melanogaster OX=7227 | JBrowse |
| Leptoseris scabra | ANN13666-RA | XP_022800873.1 | toll-like receptor 6 [Stylophora pistillata] | Q8SPE9 Toll-like receptor 4 OS=Pongo pygmaeus OX=9600 GN=TLR4 PE=3 | JBrowse |
| Leptoseris scabra | ANN13673-RA | XP_022800873.1 | toll-like receptor 6 [Stylophora pistillata] | Q8SPE9 Toll-like receptor 4 OS=Pongo pygmaeus OX=9600 GN=TLR4 PE=3 | JBrowse |
| Leptoseris scabra | ANN14172-RA | KAJ7386699.1 | hypothetical protein OS493_006710 [Desmophyllum pertusum] | – | JBrowse |
| Leptoseris scabra | ANN14178-RA | KAJ7386689.1 | hypothetical protein OS493_006698 [Desmophyllum pertusum] | – | JBrowse |
| Leptoseris scabra | ANN14179-RA | KAJ7386689.1 | hypothetical protein OS493_006698 [Desmophyllum pertusum] | Q9V477 Toll-like receptor Tollo OS=Drosophila melanogaster OX=7227 | JBrowse |
| Leptoseris scabra | ANN14180-RA | KAJ7386689.1 | hypothetical protein OS493_006698 [Desmophyllum pertusum] | Q9V477 Toll-like receptor Tollo OS=Drosophila melanogaster OX=7227 | JBrowse |
| Leptoseris scabra | ANN14201-RA | XP_015760917.1 | PREDICTED: toll-like receptor 6 [Acropora digitifera] | Q9V477 Toll-like receptor Tollo OS=Drosophila melanogaster OX=7227 | JBrowse |
| Leptoseris scabra | ANN14203-RA | KAJ7386689.1 | hypothetical protein OS493_006698 [Desmophyllum pertusum] | Q9V477 Toll-like receptor Tollo OS=Drosophila melanogaster OX=7227 | JBrowse |
