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1 sequences in this family share a gene identifier with another member, so the 2,804 sequences above are 2,803 distinct genes — none is counted twice.
Support counts the member genes carrying the term. % of genes is that count over all 2,803 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 2322 / 2,803 | 82.8% | 97.6% of 2,380 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 2396 / 2,803 | 85.5% | 98.8% of 2,426 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 2369 / 2,803 | 84.5% | 97.7% of 2,426 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 2365 / 2,803 | 84.4% | 97.5% of 2,426 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 2247 / 2,803 | 80.2% | 92.6% of 2,426 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 2228 / 2,803 | 79.5% | 91.8% of 2,426 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 1660 / 2,803 | 59.2% | 68.4% of 2,426 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN05940-RA | KAJ7379244.1 | hypothetical protein OS493_017753 [Desmophyllum pertusum] | P33450 Cadherin-related tumor suppressor OS=Drosophila melanogaster | JBrowse |
| Leptoseris scabra | ANN07803-RA | KAJ7381100.1 | Protocadherin Fat 4 [Desmophyllum pertusum] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Leptoseris scabra | ANN07804-RA | XP_020618778.1 | LOW QUALITY PROTEIN: cadherin-23-like, partial [Orbicella faveolata] | Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapien | JBrowse |
| Leptoseris scabra | ANN08667-RA | CAH3153822.1 | unnamed protein product, partial [Porites lobata] | P33450 Cadherin-related tumor suppressor OS=Drosophila melanogaster | JBrowse |
| Leptoseris scabra | ANN16260-RA | CAH3171486.1 | unnamed protein product [Porites lobata] | Q99PF4 Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2 | JBrowse |
| Leptoseris scabra | ANN22299-RA | CAH3192279.1 | unnamed protein product [Porites evermanni] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Leptoseris scabra | ANN22508-RA | CAH3127282.1 | unnamed protein product [Porites lobata] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Leptoseris scabra | ANN22578-RA | XP_044176312.1 | protocadherin Fat 1-like [Acropora millepora] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Leptoseris scabra | ANN30754-RA | CAH3018673.1 | unnamed protein product [Porites evermanni] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Leptoseris scabra | ANN31763-RA | CAH3179920.1 | unnamed protein product [Porites lobata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
