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This orthogroup contains 1,377 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,377 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF12906 | RINGv — RING-variant domain | 1216 / 1,377 | 88.3% | 99.7% of 1,220 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 1216 / 1,377 | 88.3% | 99.2% of 1,226 | ≥80% support |
| PANTHER | PTHR46065 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER | 1023 / 1,377 | 74.3% | 83.7% of 1,223 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 906 / 1,377 | 65.8% | 73.9% of 1,226 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 906 / 1,377 | 65.8% | 73.9% of 1,226 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN00168-RA | XP_020615182.1 | E3 ubiquitin-protein ligase MARCH3-like [Orbicella faveolata] | – | JBrowse |
| Leptoseris scabra | ANN04143-RA | XP_020623872.1 | E3 ubiquitin-protein ligase MARCH2-like [Orbicella faveolata] | Q5PQ35 E3 ubiquitin-protein ligase MARCHF2 OS=Xenopus laevis OX=835 | JBrowse |
| Leptoseris scabra | ANN12408-RA | XP_029207466.2 | E3 ubiquitin-protein ligase MARCHF2-like [Acropora millepora] | Q6NZQ8 E3 ubiquitin-protein ligase MARCHF1 OS=Mus musculus OX=10090 | JBrowse |
| Leptoseris scabra | ANN12555-RA | KAJ7382569.1 | hypothetical protein OS493_034205 [Desmophyllum pertusum] | Q6NZQ8 E3 ubiquitin-protein ligase MARCHF1 OS=Mus musculus OX=10090 | JBrowse |
| Leptoseris scabra | ANN13545-RA | KAJ7370534.1 | hypothetical protein OS493_031819 [Desmophyllum pertusum] | Q8TCQ1 E3 ubiquitin-protein ligase MARCHF1 OS=Homo sapiens OX=9606 | JBrowse |
| Leptoseris scabra | ANN23889-RA | CAH3035878.1 | unnamed protein product [Porites lobata] | Q5T0T0 E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 | JBrowse |
