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This orthogroup contains 327 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 327 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0003676 Molecular Function | nucleic acid binding | 270 / 327 | 82.6% | 100.0% of 270 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 268 / 327 | 82.0% | 99.3% of 270 | ≥80% support |
| PANTHER | PTHR32343 | SERINE/ARGININE-RICH SPLICING FACTOR | 220 / 327 | 67.3% | 92.1% of 239 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 260 / 327 | 79.5% | 99.6% of 261 | ≥50% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 220 / 327 | 67.3% | 81.5% of 270 | ≥50% support |
| KEGG | K13165 | SREK1, SFRS12 — Spliceosome | 188 / 327 | 57.5% | 97.4% of 193 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN29652-RA | RMX52737.1 | hypothetical protein pdam_00022405 [Pocillopora damicornis] | Q8BZX4 Splicing regulatory glutamine/lysine-rich protein 1 OS=Mus m | JBrowse |
