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This orthogroup contains 326 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 326 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00035 | dsrm — Double-stranded RNA binding motif | 288 / 326 | 88.3% | 98.6% of 292 | ≥80% support |
| GO | GO:0003725 Molecular Function | double-stranded RNA binding | 291 / 326 | 89.3% | 100.0% of 291 | ≥80% support |
| PANTHER | PTHR46054 | MATERNAL EFFECT PROTEIN STAUFEN | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0007281 Biological Process | germ cell development | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0008298 Biological Process | intracellular mRNA localization | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0010494 Cellular Component | cytoplasmic stress granule | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0035418 Biological Process | protein localization to synapse | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0043005 Cellular Component | neuron projection | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0043025 Cellular Component | neuronal cell body | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:0098964 Biological Process | anterograde dendritic transport of messenger ribonucleoprotein complex | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
| GO | GO:1990124 Cellular Component | obsolete messenger ribonucleoprotein complex | 187 / 326 | 57.4% | 64.3% of 291 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN16046-RA | CAH3133357.1 | unnamed protein product [Porites lobata] | Q7ZW47 Double-stranded RNA-binding protein Staufen homolog 2 OS=Dan | JBrowse |
