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This orthogroup contains 287 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 287 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10627 | SCP160 | 233 / 287 | 81.2% | 97.9% of 238 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 233 / 287 | 81.2% | 97.5% of 239 | ≥80% support |
| Pfam | PF00013 | KH_1 — KH domain | 213 / 287 | 74.2% | 89.1% of 239 | ≥50% support |
| Pfam | PF00536 | SAM_1 — SAM domain (Sterile alpha motif) | 188 / 287 | 65.5% | 78.7% of 239 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 214 / 287 | 74.6% | 89.5% of 239 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 213 / 287 | 74.2% | 89.1% of 239 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 196 / 287 | 68.3% | 82.0% of 239 | ≥50% support |
| KEGG | K18756 | BICC1, BICC — Messenger RNA biogenesis | 184 / 287 | 64.1% | 97.9% of 188 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN07546-RA | XP_020613362.1 | protein bicaudal C homolog 1-B-like [Orbicella faveolata] | Q99MQ1 Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bic | JBrowse |
