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This orthogroup contains 274 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 274 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR14152 | SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES | 222 / 274 | 81.0% | 100.0% of 222 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 232 / 274 | 84.7% | 100.0% of 232 | ≥80% support |
| GO | GO:0046540 Cellular Component | U4/U6 x U5 tri-snRNP complex | 229 / 274 | 83.6% | 98.7% of 232 | ≥80% support |
| GO | GO:0000481 Biological Process | maturation of 5S rRNA | 222 / 274 | 81.0% | 95.7% of 232 | ≥80% support |
| GO | GO:0045292 Biological Process | mRNA cis splicing, via spliceosome | 222 / 274 | 81.0% | 95.7% of 232 | ≥80% support |
| Pfam | PF03343 | SART-1 | 216 / 274 | 78.8% | 94.7% of 228 | ≥50% support |
| Pfam | PF19252 | HIND | 165 / 274 | 60.2% | 72.4% of 228 | ≥50% support |
| KEGG | K11984 | SART1, HAF, SNU66 — Ubiquitin system | 166 / 274 | 60.6% | 98.8% of 168 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN34686-RA | XP_044171241.1 | U4/U6.U5 tri-snRNP-associated protein 1-like isoform X1 [Acropora millepora] | Q5XIW8 U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus | JBrowse |
