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This orthogroup contains 242 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 242 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46309 | PHD FINGER PROTEIN 12 | 209 / 242 | 86.4% | 97.2% of 215 | ≥80% support |
| Pfam | PF00628 | PHD | 196 / 242 | 81.0% | 93.3% of 210 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 211 / 242 | 87.2% | 98.1% of 215 | ≥80% support |
| GO | GO:0000122 Biological Process | negative regulation of transcription by RNA polymerase II | 209 / 242 | 86.4% | 97.2% of 215 | ≥80% support |
| GO | GO:0003714 Molecular Function | transcription corepressor activity | 209 / 242 | 86.4% | 97.2% of 215 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 209 / 242 | 86.4% | 97.2% of 215 | ≥80% support |
| GO | GO:0070822 Cellular Component | Sin3-type complex | 209 / 242 | 86.4% | 97.2% of 215 | ≥80% support |
| GO | GO:0140110 Molecular Function | transcription regulator activity | 209 / 242 | 86.4% | 97.2% of 215 | ≥80% support |
| Pfam | PF16737 | PHF12_MRG_bd — PHD finger protein 12 MRG binding domain | 160 / 242 | 66.1% | 76.2% of 210 | ≥50% support |
| Pfam | PF00498 | FHA | 153 / 242 | 63.2% | 72.9% of 210 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 192 / 242 | 79.3% | 89.3% of 215 | ≥50% support |
| KEGG | K26244 | PHF12, RCO1 — Chromosome and associated proteins | 181 / 242 | 74.8% | 98.9% of 183 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN25853-RA | CAH3028704.1 | unnamed protein product [Porites evermanni] | Q5SPL2 PHD finger protein 12 OS=Mus musculus OX=10090 GN=Phf12 PE=1 | JBrowse |
