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This orthogroup contains 230 genes from 133 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 230 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF04803 | Cor1 | 186 / 230 | 80.9% | 99.5% of 187 | ≥80% support |
| PANTHER | PTHR19368 | XLR/SCP3/FAM9 | 182 / 230 | 79.1% | 98.9% of 184 | ≥50% support |
| GO | GO:0000795 Cellular Component | synaptonemal complex | 182 / 230 | 79.1% | 98.9% of 184 | ≥50% support |
| GO | GO:0007286 Biological Process | spermatid development | 182 / 230 | 79.1% | 98.9% of 184 | ≥50% support |
| GO | GO:0051321 Biological Process | meiotic cell cycle | 182 / 230 | 79.1% | 98.9% of 184 | ≥50% support |
| KEGG | K19528 | SYCP3 — Cilium and associated proteins | 136 / 230 | 59.1% | 99.3% of 137 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN17837-RA | XP_020603893.1 | synaptonemal complex protein 3-like isoform X2 [Orbicella faveolata] | Q4R764 Synaptonemal complex protein 3 OS=Macaca fascicularis OX=954 | JBrowse |
| Leptoseris scabra | ANN34143-RA | XP_020603893.1 | synaptonemal complex protein 3-like isoform X2 [Orbicella faveolata] | Q4R764 Synaptonemal complex protein 3 OS=Macaca fascicularis OX=954 | JBrowse |
