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Support counts the member genes carrying the term. % of genes is that count over all 211 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR32071 | TRANSCRIPTIONAL REGULATORY PROTEIN | 199 / 211 | 94.3% | 96.6% of 206 | ≥80% support |
| Pfam | PF00158 | Sigma54_activat — Sigma-54 interaction domain | 197 / 211 | 93.4% | 94.7% of 208 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0008134 Molecular Function | transcription factor binding | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 183 / 211 | 86.7% | 88.8% of 206 | ≥80% support |
| Pfam | PF02954 | HTH_8 — Bacterial regulatory protein, Fis family | 154 / 211 | 73.0% | 74.0% of 208 | ≥50% support |
| Pfam | PF00072 | Response_reg — Response regulator receiver domain | 119 / 211 | 56.4% | 57.2% of 208 | ≥50% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 154 / 211 | 73.0% | 74.8% of 206 | ≥50% support |
| GO | GO:0000160 Biological Process | phosphorelay signal transduction system | 127 / 211 | 60.2% | 61.7% of 206 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN35247-RA | WP_142929077.1 | sigma-54 dependent transcriptional regulator [Exilibacterium tricleocarpae] | Q8Z333 Transcriptional regulatory protein ZraR OS=Salmonella typhi | JBrowse |
| Leptoseris scabra | ANN35388-RA | WP_269675179.1 | sigma-54 dependent transcriptional regulator [Endozoicomonas sp. GU-1] | G3XCV0 Transcriptional regulator FleQ OS=Pseudomonas aeruginosa (st | JBrowse |
| Leptoseris scabra | ANN35517-RA | WP_210395750.1 | sigma-54 dependent transcriptional regulator [Motiliproteus sediminis] | Q9I4N3 Response regulator protein FleR OS=Pseudomonas aeruginosa (s | JBrowse |
| Leptoseris scabra | ANN35566-RA | MAH27693.1 | Fis family transcriptional regulator [Pseudoalteromonadaceae bacterium] | P19323 Formate hydrogenlyase transcriptional activator FhlA OS=Esch | JBrowse |
