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Support counts the member genes carrying the term. % of genes is that count over all 38 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11638 | ATP-DEPENDENT CLP PROTEASE | 31 / 38 | 81.6% | 88.6% of 35 | ≥80% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 32 / 38 | 84.2% | 94.1% of 34 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 31 / 38 | 81.6% | 91.2% of 34 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 31 / 38 | 81.6% | 91.2% of 34 | ≥80% support |
| GO | GO:0034605 Biological Process | cellular response to heat | 31 / 38 | 81.6% | 91.2% of 34 | ≥80% support |
| Pfam | PF00004 | AAA | 28 / 38 | 73.7% | 77.8% of 36 | ≥50% support |
| Pfam | PF17871 | AAA_lid_9 — AAA lid domain | 27 / 38 | 71.1% | 75.0% of 36 | ≥50% support |
| Pfam | PF07724 | AAA_2 — AAA domain (Cdc48 subfamily) | 22 / 38 | 57.9% | 61.1% of 36 | ≥50% support |
| Pfam | PF02861 | Clp_N — Clp amino terminal domain, pathogenicity island component | 21 / 38 | 55.3% | 58.3% of 36 | ≥50% support |
| Pfam | PF10431 | ClpB_D2-small — C-terminal, D2-small domain, of ClpB protein | 20 / 38 | 52.6% | 55.6% of 36 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN35128-RA | NPU95007.1 | ATP-dependent Clp protease ATP-binding subunit ClpA [Gammaproteobacteria bacterium] | P0ABI1 ATP-dependent Clp protease ATP-binding subunit ClpA OS=Esche | JBrowse |
| Leptoseris scabra | ANN35201-RA | HCP20091.1 | type VI secretion system ATPase TssH [Marinobacter nauticus] | Q88Q71 Chaperone protein ClpB OS=Pseudomonas putida (strain ATCC 47 | JBrowse |
| Leptoseris scabra | ANN35202-RA | MBP9956690.1 | AAA family ATPase [Pseudomonas sp.] | Q9HVN5 Chaperone protein ClpB OS=Pseudomonas aeruginosa (strain ATC | JBrowse |
| Leptoseris scabra | ANN35549-RA | NPU91365.1 | type VI secretion system ATPase TssH [Gammaproteobacteria bacterium] | Q9I742 AAA+ ATPase ClpV1 OS=Pseudomonas aeruginosa (strain ATCC 156 | JBrowse |
