← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Madracis auretenra | ENSIHXP00000001770.1 | PFX33392.1 | Homeobox protein Hox-B3a [Stylophora pistillata] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Madracis auretenra | ENSIHXP00000001782.1 | PFX33392.1 | Homeobox protein Hox-B3a [Stylophora pistillata] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Madracis auretenra | ENSIHXP00000008157.1 | XP_020612075.1 | GS homeobox 1-like [Orbicella faveolata] | Q9H4S2 GS homeobox 1 OS=Homo sapiens OX=9606 GN=GSX1 PE=1 SV=1 | JBrowse |
| Madracis auretenra | ENSIHXP00000009556.1 | CAH3119702.1 | unnamed protein product, partial [Pocillopora meandrina] | Q9W6D8 Homeobox protein BarH-like 1 (Fragment) OS=Gallus gallus OX= | JBrowse |
| Madracis auretenra | ENSIHXP00000009562.1 | CAH3119702.1 | unnamed protein product, partial [Pocillopora meandrina] | Q9W6D8 Homeobox protein BarH-like 1 (Fragment) OS=Gallus gallus OX= | JBrowse |
| Madracis auretenra | ENSIHXP00000012248.1 | XP_020632211.1 | homeobox protein Nkx-3.1-like [Orbicella faveolata] | Q91926 Homeobox protein vent1 OS=Xenopus laevis OX=8355 GN=vent1 PE | JBrowse |
| Madracis auretenra | ENSIHXP00000013122.1 | XP_027054630.1 | barH-like 2 homeobox protein [Pocillopora damicornis] | Q8VIB5 BarH-like 2 homeobox protein OS=Mus musculus OX=10090 GN=Bar | JBrowse |
| Madracis auretenra | ENSIHXP00000013707.1 | RMX46403.1 | hypothetical protein pdam_00000712 [Pocillopora damicornis] | Q9JLZ9 Ventral anterior homeobox 2 OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Madracis auretenra | ENSIHXP00000014401.1 | CAH3142739.1 | unnamed protein product [Pocillopora meandrina] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Madracis auretenra | ENSIHXP00000015563.1 | XP_027041987.1 | homeobox protein EMX1-like [Pocillopora damicornis] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Madracis auretenra | ENSIHXP00000015842.1 | CAH3142268.1 | unnamed protein product [Pocillopora meandrina] | Q03358 Homeobox protein MSX-2 OS=Mus musculus OX=10090 GN=Msx2 PE=1 | JBrowse |
| Madracis auretenra | ENSIHXP00000016657.1 | KAJ7378106.1 | hypothetical protein OS493_024771 [Desmophyllum pertusum] | A8XJD0 Homeobox protein ceh-30 OS=Caenorhabditis briggsae OX=6238 G | JBrowse |
| Madracis auretenra | ENSIHXP00000016669.1 | KAJ7378106.1 | hypothetical protein OS493_024771 [Desmophyllum pertusum] | Q24255 Homeobox protein B-H1 OS=Drosophila melanogaster OX=7227 GN= | JBrowse |
| Madracis auretenra | ENSIHXP00000017245.1 | XP_022782838.1 | homeobox protein MOX-1-like [Stylophora pistillata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Madracis auretenra | ENSIHXP00000017281.1 | XP_022800116.1 | homeobox protein Nkx-6.1-like [Stylophora pistillata] | Q60554 Homeobox protein Nkx-6.1 OS=Mesocricetus auratus OX=10036 GN | JBrowse |
| Madracis auretenra | ENSIHXP00000017770.1 | XP_027039739.1 | homeobox protein HMX3-A-like isoform X2 [Pocillopora damicornis] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Madracis auretenra | ENSIHXP00000017777.1 | XP_022802185.1 | homeobox protein engrailed-like isoform X1 [Stylophora pistillata] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Madracis auretenra | ENSIHXP00000017824.1 | XP_022790514.1 | homeobox protein notochord-like [Stylophora pistillata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Madracis auretenra | ENSIHXP00000017981.1 | CAH3139910.1 | unnamed protein product [Pocillopora meandrina] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Madracis auretenra | ENSIHXP00000017998.1 | XP_027059809.1 | homeobox protein pv.1-like [Pocillopora damicornis] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
