← Back to the gene family browser
This orthogroup contains 3,368 genes from 149 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 3,368 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 2994 / 3,368 | 88.9% | 98.4% of 3,042 | ≥80% support |
| PANTHER | PTHR24020 | COLLAGEN ALPHA | 2442 / 3,368 | 72.5% | 83.0% of 2,943 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000004307.1 | XP_015749890.1 | PREDICTED: coadhesin-like, partial [Acropora digitifera] | A8TX70 Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 | JBrowse |
| Montipora cactus | BRAKERNUSP00000004345.1 | XP_044179295.1 | uncharacterized protein LOC114977829 [Acropora millepora] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Montipora cactus | BRAKERNUSP00000007891.1 | XP_029187813.2 | collagen alpha-1(XX) chain-like [Acropora millepora] | – | JBrowse |
| Montipora cactus | BRAKERNUSP00000007909.1 | XP_044178821.1 | integrin alpha-D-like isoform X3 [Acropora millepora] | B3EWY9 Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 | JBrowse |
| Montipora cactus | BRAKERNUSP00000007910.1 | XP_044178821.1 | integrin alpha-D-like isoform X3 [Acropora millepora] | B3EWY9 Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 | JBrowse |
| Montipora cactus | BRAKERNUSP00000007911.1 | XP_044178821.1 | integrin alpha-D-like isoform X3 [Acropora millepora] | B3EWY9 Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 | JBrowse |
| Montipora cactus | BRAKERNUSP00000007912.1 | XP_044178821.1 | integrin alpha-D-like isoform X3 [Acropora millepora] | B3EWY9 Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 | JBrowse |
| Montipora cactus | BRAKERNUSP00000007922.1 | XP_029187764.2 | LOW QUALITY PROTEIN: collagen alpha-2(I) chain-like [Acropora millepora] | A2AX52 Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Montipora cactus | BRAKERNUSP00000011572.1 | XP_044179067.1 | uncharacterized protein LOC114969736 [Acropora millepora] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Montipora cactus | BRAKERNUSP00000011580.1 | XP_044179295.1 | uncharacterized protein LOC114977829 [Acropora millepora] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Montipora cactus | BRAKERNUSP00000011584.1 | XP_044179296.1 | collagen alpha-6(VI) chain-like [Acropora millepora] | Q8C6K9 Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Montipora cactus | BRAKERNUSP00000011587.1 | XP_029205891.2 | uncharacterized protein LOC114969735 [Acropora millepora] | P12111 Collagen alpha-3(VI) chain OS=Homo sapiens OX=9606 GN=COL6A3 | JBrowse |
| Montipora cactus | BRAKERNUSP00000012870.1 | CAH3170597.1 | unnamed protein product, partial [Porites lobata] | Q99715 Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12 | JBrowse |
| Montipora cactus | BRAKERNUSP00000012984.1 | XP_015763805.1 | PREDICTED: collagen alpha-3(VI) chain-like isoform X1 [Acropora digitifera] | P13944 Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL1 | JBrowse |
| Montipora cactus | BRAKERNUSP00000014665.1 | XP_015768939.1 | PREDICTED: uncharacterized protein LOC107347501 [Acropora digitifera] | P13944 Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL1 | JBrowse |
| Montipora cactus | BRAKERNUSP00000017667.1 | XP_015756905.1 | PREDICTED: matrilin-3-like [Acropora digitifera] | – | JBrowse |
| Montipora cactus | BRAKERNUSP00000022809.1 | XP_015771025.1 | PREDICTED: uncharacterized protein LOC107349390 [Acropora digitifera] | P13944 Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL1 | JBrowse |
| Montipora cactus | BRAKERNUSP00000023910.1 | XP_029200071.2 | cochlin-like [Acropora millepora] | Q05707 Collagen alpha-1(XIV) chain OS=Homo sapiens OX=9606 GN=COL14 | JBrowse |
| Montipora cactus | BRAKERNUSP00000042566.1 | XP_029197626.2 | collagen alpha-5(VI) chain-like [Acropora millepora] | – | JBrowse |
| Montipora cactus | g11036.t1.1 | none | – | JBrowse |
