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Support counts the member genes carrying the term. % of genes is that count over all 778 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD | 631 / 778 | 81.1% | 94.9% of 665 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 653 / 778 | 83.9% | 97.9% of 667 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 638 / 778 | 82.0% | 95.7% of 667 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 635 / 778 | 81.6% | 95.2% of 667 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 631 / 778 | 81.1% | 94.6% of 667 | ≥80% support |
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 618 / 778 | 79.4% | 93.2% of 663 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 611 / 778 | 78.5% | 91.9% of 665 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 618 / 778 | 79.4% | 92.7% of 667 | ≥50% support |
| GO | GO:0007276 Biological Process | gamete generation | 608 / 778 | 78.2% | 91.2% of 667 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 608 / 778 | 78.2% | 91.2% of 667 | ≥50% support |
| GO | GO:0043186 Cellular Component | P granule | 429 / 778 | 55.1% | 64.3% of 667 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000002724.1 | XP_044164157.1 | probable ATP-dependent RNA helicase DDX4 [Acropora millepora] | Q5W5U4 Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus OX=99 | JBrowse |
| Montipora cactus | BRAKERNUSP00000007780.1 | AFP52949.1 | PL10 [Fimbriaphyllia ancora] | O15523 ATP-dependent RNA helicase DDX3Y OS=Homo sapiens OX=9606 GN= | JBrowse |
| Montipora cactus | BRAKERNUSP00000007781.1 | AFP52949.1 | PL10 [Fimbriaphyllia ancora] | P16381 Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX= | JBrowse |
| Montipora cactus | BRAKERNUSP00000048640.1 | XP_015780253.1 | PREDICTED: probable ATP-dependent RNA helicase DDX4 isoform X3 [Acropora digitifera] | Q3MSQ8 Probable ATP-dependent RNA helicase DDX4 OS=Pelophylax lesso | JBrowse |
| Montipora cactus | BRAKERNUSP00000048677.1 | XP_044167578.1 | 29 kDa ribonucleoprotein B, chloroplastic-like [Acropora millepora] | O04425 Flowering time control protein FCA OS=Arabidopsis thaliana O | JBrowse |
| Montipora cactus | BRAKERNUSP00000052472.1 | XP_015778281.1 | PREDICTED: probable ATP-dependent RNA helicase DDX4, partial [Acropora digitifera] | Q61496 ATP-dependent RNA helicase DDX4 OS=Mus musculus OX=10090 GN= | JBrowse |
| Montipora cactus | g18815.t1.1 | none | – | JBrowse | |
| Montipora cactus | g32883.t1.1 | none | – | JBrowse | |
| Montipora cactus | g32883.t2.1 | none | – | JBrowse | |
| Montipora cactus | g49993.t1.1 | none | – | JBrowse | |
| Montipora cactus | g49994.t1.1 | none | – | JBrowse | |
| Montipora cactus | g8641.t1.1 | none | – | JBrowse |
