← Back to the gene family browser
This orthogroup contains 573 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 573 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 471 / 573 | 82.2% | 91.1% of 517 | ≥80% support |
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 486 / 573 | 84.8% | 94.6% of 514 | ≥80% support |
| Pfam | PF14670 | FXa_inhibition — Coagulation Factor Xa inhibitory site | 426 / 573 | 74.4% | 82.9% of 514 | ≥50% support |
| Pfam | PF00057 | Ldl_recept_a — Low-density lipoprotein receptor domain class A | 303 / 573 | 52.9% | 59.0% of 514 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 316 / 573 | 55.2% | 88.5% of 357 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000002430.1 | XP_044184112.1 | LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like [Acropora millepora] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Montipora cactus | BRAKERNUSP00000002431.1 | XP_044184112.1 | LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like [Acropora millepora] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Montipora cactus | BRAKERNUSP00000002507.1 | XP_044184112.1 | LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like [Acropora millepora] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Montipora cactus | BRAKERNUSP00000024940.1 | XP_044184112.1 | LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like [Acropora millepora] | O75197 Low-density lipoprotein receptor-related protein 5 OS=Homo s | JBrowse |
| Montipora cactus | BRAKERNUSP00000027548.1 | XP_044184112.1 | LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like [Acropora millepora] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Montipora cactus | BRAKERNUSP00000027549.1 | RMX52490.1 | hypothetical protein pdam_00013780 [Pocillopora damicornis] | Q91VN0 Low-density lipoprotein receptor-related protein 5 OS=Mus mu | JBrowse |
| Montipora cactus | BRAKERNUSP00000027555.1 | XP_015769654.1 | PREDICTED: low-density lipoprotein receptor-related protein 6-like [Acropora digitifera] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Montipora cactus | g25904.t1.1 | none | – | JBrowse | |
| Montipora cactus | g25905.t1.1 | none | – | JBrowse | |
| Montipora cactus | g25905.t2.1 | none | – | JBrowse | |
| Montipora cactus | g3272.t1.1 | none | – | JBrowse | |
| Montipora cactus | g46603.t1.1 | none | – | JBrowse | |
| Montipora cactus | g46604.t1.1 | none | – | JBrowse | |
| Montipora cactus | g46606.t1.1 | none | – | JBrowse |
