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This orthogroup contains 398 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 398 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00053 | Laminin_EGF — Laminin EGF domain | 260 / 398 | 65.3% | 74.3% of 350 | ≥50% support |
| Pfam | PF00055 | Laminin_N — Laminin N-terminal (Domain VI) | 248 / 398 | 62.3% | 70.9% of 350 | ≥50% support |
| Pfam | PF00041 | fn3 — Fibronectin type III domain | 238 / 398 | 59.8% | 68.0% of 350 | ≥50% support |
| Pfam | PF13385 | Laminin_G_3 — Concanavalin A-like lectin/glucanases superfamily | 227 / 398 | 57.0% | 64.9% of 350 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 248 / 398 | 62.3% | 70.7% of 351 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000009889.1 | XP_044162979.1 | usherin-like [Acropora millepora] | O75445 Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3 | JBrowse |
| Montipora cactus | BRAKERNUSP00000009894.1 | XP_044163420.1 | LOW QUALITY PROTEIN: usherin-like [Acropora millepora] | O75445 Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3 | JBrowse |
| Montipora cactus | BRAKERNUSP00000009895.1 | KAJ7365328.1 | hypothetical protein OS493_005432 [Desmophyllum pertusum] | Q2QI47 Usherin OS=Mus musculus OX=10090 GN=Ush2A PE=1 SV=2 | JBrowse |
| Montipora cactus | BRAKERNUSP00000009898.1 | XP_015779557.1 | PREDICTED: LOW QUALITY PROTEIN: usherin-like, partial [Acropora digitifera] | O75445 Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3 | JBrowse |
| Montipora cactus | BRAKERNUSP00000032943.1 | XP_015779557.1 | PREDICTED: LOW QUALITY PROTEIN: usherin-like, partial [Acropora digitifera] | Q8K3K1 Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2 | JBrowse |
| Montipora cactus | g20804.t1.1 | none | – | JBrowse | |
| Montipora cactus | g20805.t1.1 | none | – | JBrowse | |
| Montipora cactus | g20809.t1.1 | none | – | JBrowse | |
| Montipora cactus | g20811.t1.1 | none | – | JBrowse | |
| Montipora cactus | g33848.t1.1 | none | – | JBrowse |
