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This orthogroup contains 318 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 318 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12755 | CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P | 235 / 318 | 73.9% | 99.6% of 236 | ≥50% support |
| Pfam | PF16575 | CLP1_P — mRNA cleavage and polyadenylation factor CLP1 P-loop | 220 / 318 | 69.2% | 99.1% of 222 | ≥50% support |
| GO | GO:0000448 Biological Process | cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 235 / 318 | 73.9% | 99.6% of 236 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 235 / 318 | 73.9% | 99.6% of 236 | ≥50% support |
| GO | GO:0006396 Biological Process | RNA processing | 235 / 318 | 73.9% | 99.6% of 236 | ≥50% support |
| GO | GO:0051731 Molecular Function | polynucleotide 5'-hydroxyl-kinase activity | 235 / 318 | 73.9% | 99.6% of 236 | ≥50% support |
| KEGG | K06947 | GRC3, NOL9 — Ribosome biogenesis | 178 / 318 | 56.0% | 97.8% of 182 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000017550.1 | XP_029199757.2 | polynucleotide 5'-hydroxyl-kinase NOL9-like isoform X2 [Acropora millepora] | E7F654 Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Danio rerio OX=795 | JBrowse |
| Montipora cactus | g19057.t1.1 | none | – | JBrowse |
