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This orthogroup contains 304 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 304 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21497 | UBIQUITIN LIGASE E3 ALPHA-RELATED | 264 / 304 | 86.8% | 99.6% of 265 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 264 / 304 | 86.8% | 99.6% of 265 | ≥80% support |
| GO | GO:0071596 Biological Process | ubiquitin-dependent protein catabolic process via the N-end rule pathway | 264 / 304 | 86.8% | 99.6% of 265 | ≥80% support |
| Pfam | PF18995 | PRT6_C — Proteolysis_6 C-terminal | 182 / 304 | 59.9% | 75.8% of 240 | ≥50% support |
| Pfam | PF02207 | zf-UBR — Putative zinc finger in N-recognin (UBR box) | 165 / 304 | 54.3% | 68.8% of 240 | ≥50% support |
| Pfam | PF02617 | ClpS | 163 / 304 | 53.6% | 67.9% of 240 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 165 / 304 | 54.3% | 62.3% of 265 | ≥50% support |
| GO | GO:0030163 Biological Process | protein catabolic process | 163 / 304 | 53.6% | 61.5% of 265 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000036662.1 | XP_029189284.2 | E3 ubiquitin-protein ligase UBR2-like [Acropora millepora] | Q8IWV8 E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Montipora cactus | BRAKERNUSP00000036663.1 | XP_029189284.2 | E3 ubiquitin-protein ligase UBR2-like [Acropora millepora] | Q8IWV8 E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Montipora cactus | BRAKERNUSP00000036664.1 | XP_029189284.2 | E3 ubiquitin-protein ligase UBR2-like [Acropora millepora] | Q8IWV8 E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Montipora cactus | BRAKERNUSP00000036722.1 | XP_015779169.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR2-like [Acropora digitifera] | Q8IWV8 E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Montipora cactus | g39589.t1.1 | none | – | JBrowse | |
| Montipora cactus | g39590.t1.1 | none | – | JBrowse | |
| Montipora cactus | g39590.t2.1 | none | – | JBrowse | |
| Montipora cactus | g39590.t3.1 | none | – | JBrowse |
