← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 293 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45623 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | 239 / 293 | 81.6% | 96.8% of 247 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0042393 Molecular Function | histone binding | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0034728 Biological Process | nucleosome organization | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| GO | GO:0000785 Cellular Component | chromatin | 239 / 293 | 81.6% | 100.0% of 239 | ≥80% support |
| Pfam | PF18375 | CDH1_2_SANT_HL1 — CDH1/2 SANT-Helical linker 1 | 204 / 293 | 69.6% | 81.9% of 249 | ≥50% support |
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 201 / 293 | 68.6% | 80.7% of 249 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 198 / 293 | 67.6% | 79.5% of 249 | ≥50% support |
| Pfam | PF00385 | Chromo | 196 / 293 | 66.9% | 78.7% of 249 | ≥50% support |
| Pfam | PF13907 | CHD1-like_C — Chromodomain-helicase-DNA-binding protein 1-like, C-terminal | 190 / 293 | 64.9% | 76.3% of 249 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 202 / 293 | 68.9% | 84.5% of 239 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000005799.1 | XP_029193411.2 | chromodomain-helicase-DNA-binding protein 1-like isoform X1 [Acropora millepora] | O14646 Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens | JBrowse |
| Montipora cactus | BRAKERNUSP00000031256.1 | XP_029193414.2 | chromodomain-helicase-DNA-binding protein 1-like isoform X3 [Acropora millepora] | E9PZM4 Chromodomain-helicase-DNA-binding protein 2 OS=Mus musculus | JBrowse |
| Montipora cactus | g25036.t1.1 | none | – | JBrowse | |
| Montipora cactus | g45815.t1.1 | none | – | JBrowse |
