← Back to the gene family browser
This orthogroup contains 269 genes from 100 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 269 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10199 | THROMBOSPONDIN | 164 / 269 | 61.0% | 87.7% of 187 | ≥50% support |
| Pfam | PF05735 | TSP_C — Thrombospondin C-terminal region | 149 / 269 | 55.4% | 64.8% of 230 | ≥50% support |
| Pfam | PF02412 | TSP_3 — Thrombospondin type 3 repeat | 146 / 269 | 54.3% | 63.5% of 230 | ≥50% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 170 / 269 | 63.2% | 92.9% of 183 | ≥50% support |
| GO | GO:0007155 Biological Process | cell adhesion | 168 / 269 | 62.5% | 91.8% of 183 | ≥50% support |
| GO | GO:0062023 Cellular Component | collagen-containing extracellular matrix | 164 / 269 | 61.0% | 89.6% of 183 | ≥50% support |
| GO | GO:0005576 Cellular Component | extracellular region | 149 / 269 | 55.4% | 81.4% of 183 | ≥50% support |
| GO | GO:0016020 Cellular Component | membrane | 145 / 269 | 53.9% | 79.2% of 183 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000029668.1 | XP_044174137.1 | thrombospondin-2-like isoform X2 [Acropora millepora] | Q03350 Thrombospondin-2 OS=Mus musculus OX=10090 GN=Thbs2 PE=1 SV=2 | JBrowse |
| Montipora cactus | BRAKERNUSP00000029677.1 | XP_015756319.1 | PREDICTED: uncharacterized protein LOC107335793 [Acropora digitifera] | – | JBrowse |
| Montipora cactus | g542.t1.1 | none | – | JBrowse | |
| Montipora cactus | g544.t1.1 | none | – | JBrowse |
