← Back to the gene family browser
This orthogroup contains 267 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 267 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10694 | LYSINE-SPECIFIC DEMETHYLASE | 207 / 267 | 77.5% | 91.2% of 227 | ≥50% support |
| Pfam | PF00628 | PHD | 211 / 267 | 79.0% | 91.3% of 231 | ≥50% support |
| Pfam | PF08429 | PLU-1 | 200 / 267 | 74.9% | 86.6% of 231 | ≥50% support |
| Pfam | PF02373 | JmjC | 193 / 267 | 72.3% | 83.6% of 231 | ≥50% support |
| Pfam | PF21323 | KDM5_C-hel — Lysine-specific demethylase 5, C-terminal helical domain | 192 / 267 | 71.9% | 83.1% of 231 | ≥50% support |
| Pfam | PF02928 | zf-C5HC2 — C5HC2 zinc finger | 188 / 267 | 70.4% | 81.4% of 231 | ≥50% support |
| Pfam | PF01388 | ARID | 187 / 267 | 70.0% | 81.0% of 231 | ≥50% support |
| Pfam | PF02375 | JmjN | 187 / 267 | 70.0% | 81.0% of 231 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 210 / 267 | 78.7% | 92.5% of 227 | ≥50% support |
| GO | GO:0000785 Cellular Component | chromatin | 207 / 267 | 77.5% | 91.2% of 227 | ≥50% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 207 / 267 | 77.5% | 91.2% of 227 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 207 / 267 | 77.5% | 91.2% of 227 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 207 / 267 | 77.5% | 91.2% of 227 | ≥50% support |
| GO | GO:0032452 Molecular Function | histone demethylase activity | 207 / 267 | 77.5% | 91.2% of 227 | ≥50% support |
| GO | GO:0034647 Molecular Function | histone H3K4me/H3K4me2/H3K4me3 demethylase activity | 206 / 267 | 77.2% | 90.8% of 227 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 192 / 267 | 71.9% | 84.6% of 227 | ≥50% support |
| KEGG | K11446 | KDM5, JARID1 — Chromosome and associated proteins | 188 / 267 | 70.4% | 97.4% of 193 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000005939.1 | XP_015761834.1 | PREDICTED: lysine-specific demethylase 5D-like [Acropora digitifera] | Q9BY66 Lysine-specific demethylase 5D OS=Homo sapiens OX=9606 GN=KD | JBrowse |
| Montipora cactus | BRAKERNUSP00000028287.1 | XP_029205144.2 | lysine-specific demethylase 5C-like [Acropora millepora] | P29375 Lysine-specific demethylase 5A OS=Homo sapiens OX=9606 GN=KD | JBrowse |
| Montipora cactus | g42841.t1.1 | none | – | JBrowse | |
| Montipora cactus | g5021.t1.1 | none | – | JBrowse |
