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This orthogroup contains 256 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 256 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR31576 | TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B | 209 / 256 | 81.6% | 99.1% of 211 | ≥80% support |
| GO | GO:0001164 Molecular Function | RNA polymerase I core promoter sequence-specific DNA binding | 209 / 256 | 81.6% | 99.1% of 211 | ≥80% support |
| GO | GO:0001188 Biological Process | RNA polymerase I preinitiation complex assembly | 209 / 256 | 81.6% | 99.1% of 211 | ≥80% support |
| GO | GO:0006360 Biological Process | transcription by RNA polymerase I | 209 / 256 | 81.6% | 99.1% of 211 | ≥80% support |
| GO | GO:0042790 Biological Process | nucleolar large rRNA transcription by RNA polymerase I | 209 / 256 | 81.6% | 99.1% of 211 | ≥80% support |
| GO | GO:0070860 Cellular Component | RNA polymerase I core factor complex | 209 / 256 | 81.6% | 99.1% of 211 | ≥80% support |
| GO | GO:0005668 Cellular Component | RNA polymerase transcription factor SL1 complex | 208 / 256 | 81.3% | 98.6% of 211 | ≥80% support |
| Pfam | PF20645 | Rrn7_cyclin_C — Rrn7/TAF1B, C-terminal cyclin domain | 174 / 256 | 68.0% | 84.1% of 207 | ≥50% support |
| Pfam | PF20644 | Rrn7_cyclin_N — Rrn7/TAF1B, N-terminal cyclin domain | 171 / 256 | 66.8% | 82.6% of 207 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000020732.1 | XP_029209083.2 | TATA box-binding protein-associated factor RNA polymerase I subunit B-like [Acropora millepora] | Q5ZJR9 TATA box-binding protein-associated factor RNA polymerase I | JBrowse |
| Montipora cactus | BRAKERNUSP00000020771.1 | XP_029209083.2 | TATA box-binding protein-associated factor RNA polymerase I subunit B-like [Acropora millepora] | – | JBrowse |
| Montipora cactus | g16631.t1.1 | none | – | JBrowse | |
| Montipora cactus | g16632.t1.1 | none | – | JBrowse |
