← Back to the gene family browser
This orthogroup contains 255 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 255 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11800 | DNA-DIRECTED RNA POLYMERASE | 216 / 255 | 84.7% | 98.2% of 220 | ≥80% support |
| Pfam | PF01193 | RNA_pol_L — RNA polymerase Rpb3/Rpb11 dimerisation domain | 210 / 255 | 82.4% | 98.1% of 214 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 221 / 255 | 86.7% | 100.0% of 221 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 221 / 255 | 86.7% | 100.0% of 221 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 220 / 255 | 86.3% | 99.6% of 221 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 219 / 255 | 85.9% | 99.1% of 221 | ≥80% support |
| GO | GO:0001056 Molecular Function | RNA polymerase III activity | 219 / 255 | 85.9% | 99.1% of 221 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 216 / 255 | 84.7% | 97.7% of 221 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 216 / 255 | 84.7% | 97.7% of 221 | ≥80% support |
| Pfam | PF01000 | RNA_pol_A_bac — RNA polymerase Rpb3/RpoA insert domain | 169 / 255 | 66.3% | 79.0% of 214 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 150 / 255 | 58.8% | 67.9% of 221 | ≥50% support |
| KEGG | K03027 | RPAC1, RPC40, POLR1C — Transcription machinery | 164 / 255 | 64.3% | 98.8% of 166 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000001145.1 | XP_029197428.2 | DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X1 [Acropora millepora] | O15160 DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo | JBrowse |
| Montipora cactus | g9804.t1.1 | none | – | JBrowse |
