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Support counts the member genes carrying the term. % of genes is that count over all 244 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13763 | BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| Pfam | PF00533 | BRCT | 143 / 244 | 58.6% | 73.0% of 196 | ≥50% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0006281 Biological Process | DNA repair | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0006974 Biological Process | DNA damage response | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0031436 Cellular Component | BRCA1-BARD1 complex | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0035066 Biological Process | obsolete positive regulation of histone acetylation | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0035067 Biological Process | obsolete negative regulation of histone acetylation | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0045717 Biological Process | negative regulation of fatty acid biosynthetic process | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
| GO | GO:0070531 Cellular Component | BRCA1-A complex | 194 / 244 | 79.5% | 99.0% of 196 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000014934.1 | XP_044179723.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114955279 [Acropora millepora] | F4I443 BRCA1-associated RING domain protein 1 OS=Arabidopsis thalia | JBrowse |
| Montipora cactus | g41808.t1.1 | none | – | JBrowse |
