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This orthogroup contains 232 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 232 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22747 | NUCLEOPLASMIN | 178 / 232 | 76.7% | 99.4% of 179 | ≥50% support |
| Pfam | PF03066 | Nucleoplasmin | 178 / 232 | 76.7% | 91.8% of 194 | ≥50% support |
| Pfam | PF16276 | NPM1-C — Nucleophosmin C-terminal domain | 117 / 232 | 50.4% | 60.3% of 194 | ≥50% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 178 / 232 | 76.7% | 92.7% of 192 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 178 / 232 | 76.7% | 92.7% of 192 | ≥50% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 178 / 232 | 76.7% | 92.7% of 192 | ≥50% support |
| GO | GO:0005730 Cellular Component | nucleolus | 178 / 232 | 76.7% | 92.7% of 192 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 178 / 232 | 76.7% | 92.7% of 192 | ≥50% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 178 / 232 | 76.7% | 92.7% of 192 | ≥50% support |
| GO | GO:0042393 Molecular Function | histone binding | 178 / 232 | 76.7% | 92.7% of 192 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 117 / 232 | 50.4% | 60.9% of 192 | ≥50% support |
| KEGG | K11276 | NPM1 — Chromosome and associated proteins | 131 / 232 | 56.5% | 97.0% of 135 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000020770.1 | CAH3015650.1 | unnamed protein product [Porites evermanni] | Q9NLA3 Nucleoplasmin-like protein ANO39 OS=Patiria pectinifera OX=7 | JBrowse |
| Montipora cactus | g16616.t1.1 | none | – | JBrowse |
