← Back to the gene family browser
This orthogroup contains 228 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 228 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR39267 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 | 188 / 228 | 82.5% | 99.5% of 189 | ≥80% support |
| Pfam | PF20635 | SMN_YG-box — Survival Motor Neuron, YG-box | 187 / 228 | 82.0% | 91.2% of 205 | ≥80% support |
| Pfam | PF06003 | SMN_Tudor — Survival motor neuron protein (SMN), Tudor domain | 178 / 228 | 78.1% | 86.8% of 205 | ≥50% support |
| Pfam | PF20636 | SMN_G2-BD — Survival Motor Neuron, Gemin2-binding domain | 161 / 228 | 70.6% | 78.5% of 205 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 179 / 228 | 78.5% | 100.0% of 179 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 178 / 228 | 78.1% | 99.4% of 179 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 178 / 228 | 78.1% | 99.4% of 179 | ≥50% support |
| GO | GO:0006397 Biological Process | mRNA processing | 178 / 228 | 78.1% | 99.4% of 179 | ≥50% support |
| KEGG | K13129 | SMN — Spliceosome | 151 / 228 | 66.2% | 98.1% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000052629.1 | CAH3156022.1 | unnamed protein product [Porites lobata] | Q4R4F8 Survival motor neuron protein OS=Macaca fascicularis OX=9541 | JBrowse |
| Montipora cactus | g25197.t1.1 | none | – | JBrowse |
